Del Amparo, R. and Arenas, M. 2023. Influence of substitution model selection on protein phylogenetic tree reconstruction, Gene. Volume 865, ISSN 0378-1119.

Del Amparo, R.; González-Vázquez, L.D.; Rodríguez-Moure, L.; Bastolla, U. and Arenas, M. 2023. Consequences of Genetic Recombination on Protein Folding Stability, J Mol Evol 91, 33–45.

Del Amparo, R. and Arenas, M. 2022. Consequences of Substitution Model Selection on Protein Ancestral Sequence Reconstruction, Molecular Biology and Evolution. Volume 39, Issue 7, July 2022, msac144.

Del Amparo, R. and Arenas, M. 2022. HIV Protease and Integrase Empirical Substitution Models of Evolution: Protein-Specific Models Outperform Generalist Models. Genes, 13(1), 61.

Del Amparo, R.; Branco, C.; Arenas, J.; Vicens, A. and Arenas, M. 2021. Analysis of selection in protein-coding sequences accounting for common biases. Briefings in Bioinformatics, 22(5), 2021, 1-10. 

Del Amparo, R.; Vicens, A. and Arenas, M. 2020. The Influence of Heterogeneous Codon Frequencies along Sequences on the Estimation of Molecular Adaptation. Bioinformatics, 36(2): 430-436. 

Henriques, M.S.C.; Del Amparo, R.; Pérez-Álvarez, D.; Nogueira,  B.A.; Rodríguez-Argüelles, M.C.; Paixão, J.A. 2017. Synthesis, structural and spectroscopic studies of 2-oxoacenaphthylen-1(2H)-ylidene nicotinohydrazide. Spectrochimica Acta Part A: Molecular and Biomolecular, 172: 189-198.

Congresses

Autors: R. Del Amparo and M. Arenas.
Title: Novel empirical substitution models for specific HIV-1 proteins
Participation: Poster
Congress: Society for Molecular Biology and Evolution (SMBE) 2021
Place: Virtual
Data: 3-8 July 2021

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Autors: R. Del Amparo and M. Arenas.
Title: Specific substitution models for the HIV-1 protease and integrase
Participation: Poster
Congress: 4rd Annual Meeting CINBIO
Place: Vigo (Spain)
Data: 1-2 July 2021

Most outstanding poster of the "4th CINBIO Annual Meeting" (Vigo, July 2021)

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Autors: R. Del Amparo, L. Rodriguez-Moure, U. Bastolla and M. Arenas.
Title: Influence of empirical substitution models of evolution and recombination on protein folding stability
Participation: Oral Comunication
Congress: XVI Encontro Nacional Biología Evolutiva (ENBE)
Place: O Porto (Portugal)
Data: 16-17 December 2020

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Autors: R. Del Amparo, L. Rodriguez-Moure, U. Bastolla and M. Arenas.
Title: Influence of empirical substitution models of evolution and recombination on protein folding stability
Participation: Poster
Congress: ISCB-Latin America SolBio BioNetMX Symposium on Bioinformatics 2020
Place: Mexico (Virtual)
Data: 28-29 November 2020

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Autors: R. Del Amparo, A. Vicens and M. Arenas.
Title: The estimation of dN/dS is biased when ignoring the variation of codon frequencies among sites 
Participation: Poster
Congress: XV Encontro Nacional Biología Evolutiva (ENBE)
Place: O Porto (Portugal)
Data: 14-15 November 2019

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Autors: R. Del Amparo, A. Vicens and M. Arenas.
Title: Ignored heterogeneous codon frequencies among sites biases the estimation of molecular adaptation through dN/dS
Participation: Poster
Congress: Society for Molecular Biology and Evolution (SMBE) 2019 
Place: Manchester (England)
Data: 21-25 July 2019 

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Autors: R. Del Amparo, A. Vicens and M. Arenas.
Title: Estimating molecular adaptation in protein-coding sequences accounting for heterogeneous codon frequencies among sites
Participation: Poster
Congress: 3rd Annual Meeting CINBIO
Place: Vigo (Spain)
Data: 1-2 July 2019

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Autors: R. Del Amparo and M.C. Rodríguez-Argüelles.
Title: Synthesis and characterization of new metal complexes of 2-oxoacenaphthylen-1(2H)-ylidene nicotinohydrazide
Participation: Oral
Congress: XXII Encontro Luso-Galego de Química
Place: Bragança (Portugal)
Data: 9-11 November 2016

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Autors: M.S.C. Henriques, N. Gonzalez-Ballesteros, R. Del Amparo, B.F.O. Nascimento, M. Piñeiro, M.C. Rodríguez-Argüelles and J.A. Paixão.
Title: Crystallographic structure and supramolecular interactions in two 3,4-dihydropyrimidin-2(1H)-ones
Participation: Oral
Congress: XX Encontro Luso-Galego de Química
Place: O Porto (Portugal)
Data: 26-28 November 2014

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Autors: M.S.C. Henriques, R. Del Amparo, M.C. Rodríguez-Argüelles and J.A. Paixão.

Title: Crystallographic structure and supramolecular interactions in two 3,4 dihydropyrimidin-2(1H)-ones
Participation: Oral
Congress: Colloquium Spectroscopicum Internationale XXXIX 
Place: Figueira da Foz (Portugal)
Data: 30-3 September 2014